DeepTrans Bio

Bioinformatics & Omics Evidence Generation

NGS analysis, single-cell transcriptomics, public database mining, and publication-ready figures to generate structured evidence for R&D and translational decisions.

Request Bioinformatics Review

What this service helps with

  • R&D teams who have omics data and need structured evidence generation and visualization.
  • Researchers preparing manuscripts who need supplementary analyses, statistical tests, or revised figures.
  • Graduate students and postdocs needing structured analysis reports for thesis chapters or committee meetings.
  • Collaborators who need a second opinion on analysis design, methods, or result interpretation.

Typical Inputs

  • Raw or processed omics data
  • Analysis requirements or figure specifications
  • Reviewer comments (if revision)
  • Target journal or conference format

Analysis Modules

RNA-seq / WES / NGS analysis

Differential expression, variant calling, pathway enrichment, and quality-control reporting.

Single-cell RNA-seq analysis

Cell clustering, marker identification, trajectory inference, and cell-type annotation.

TCGA / GEO / public database mining

Retrospective analysis of public datasets for hypothesis generation or validation.

Survival / ROC / regression / MR analysis

Statistical modeling for clinical endpoints, predictive performance, and causal inference.

Publication-ready figure generation

Publication-standard figures formatted for target journal requirements, including vector exports.

Revision supplementary analysis

Addressing reviewer comments with new analyses, additional figures, or rebuttal materials.

Deliverables

  • Bioinformatics analysis report
  • Publication-ready figures
  • Statistical result tables
  • Methods summary
  • Supplementary tables
  • Revision analysis package

FAQ

Do you guarantee publication?

No. Analysis quality and figure preparation support the manuscript, but editorial decisions, peer review, and journal fit are outside our scope.

Can you handle large NGS datasets?

Yes. Cloud-based or HPC processing can be arranged for large-scale genomic, transcriptomic, or single-cell datasets.

What figure formats do you provide?

High-resolution PNG, PDF vector, and TIFF formats. Figures are styled to match common journal requirements (Nature, Cell, NEJM, etc.).

Can you help with reviewer responses?

Yes. Revision support includes new analyses, additional figures, and structured response to reviewer comments.

Analysis support for research communication and evidence generation only. Does not replace supervisory guidance, institutional review, or editorial decisions.